CDS

Accession Number TCMCG073C19287
gbkey CDS
Protein Id XP_019058460.1
Location join(1089415..1091470,1091668..1092484,1092574..1092864,1092963..1093164)
Gene LOC104816836
GeneID 104816836
Organism Tarenaya hassleriana

Protein

Length 1121aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_019202915.1
Definition PREDICTED: phytochrome A [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category K
Description Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
KEGG_ko ko:K12120        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04712        [VIEW IN KEGG]
map04712        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009638        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009881        [VIEW IN EMBL-EBI]
GO:0009883        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010018        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010201        [VIEW IN EMBL-EBI]
GO:0010203        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031516        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046685        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055122        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071490        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCAGCCTCTAGGCCTGCCCGGTCTTCTGATGACACCAGGCGATCGAGACATGGTGCTAGGGTCATTGCACAGACCACTGTAGATGCAAAACTCCATGCTGATTTCGAGGAATCAGGCAGTTCCTTCGATTACTCGAGCTCGGTTCGAGTCACTGGTCCTGTCGTGGAAGACCAACCACCGAGGTCTGACAAGGTGACTACTGCTTATCTTCTTCACATACAGAAGGGTAAGCTGATTCAACCCTTTGGATGTTTGCTGGCCTTGGACGAGAAGACCTTCAAGGTCATTGCATACAGCGAGAATGCCCCCGAGATGTTGACCATGACTAGCCACGCAGTTCCTAGTGTTGGGGAGCACCCCGTTCTTGGAATCGGGACAGAAATAAGGACCCTTTTCACTGCTCCTAGTGCCTCTGCCCTGCAGAAGGCACTCGGATTTGGGGATGTTTCTCTCTTGAATCCCATTCTTGTTCACTGTAAGACTTCTGCAAAGCCCTTTTACGCAATTGTCCACAGGGTAACAGGGAGCATCATCGTTGATTTCGAACCTGTGAAGCCCTACGAAGTTCCCATGACAGCTGCTGGTGCTCTACAGTCGTACAAGCTTGCCGCCAAAGCAATAACCAGATTGCAGACATTGCCCAGCGGGAGCATGGACAGGCTGTGTGATACGATGGTTCAGGAGGTATTTGAACTCACGGGTTACGACAGGGTTATGGCCTATAAATTCCATGATGATGATCATGGTGAGGTTATCTCCGAGGTTACAAAACCCGGGCTAGAGCCTTATCTTGGATTGCATTATCCAGCCACCGACATTCCTCAAGCTGCCCGGTTTCTGTTTATGAAGAACAAAGTCAGGATGATAGTTGATTGCCGGGCAAAACACGTTAAGGTGCTTCAAGACGAGAAGCTGCCATTTGATCTCACCTTGTGTGGCTCAACCCTTAGGGCACCCCACAGCTGCCATCTTCAGTATATGGAGAACATGAGTTCAATTGCCTCTCTCGTCATGGCGGTGGTGTTTAACGAGGATGAAGGAGAGGGTGACGTCCCTGATTCTGCACCGCCTCATAAGAGGAAGAGGCTATGGGGTTTGGTGGTGTGCCATAACACGACCCCGAGATTTGTTCCGTTTCCTCTTAGGTATGCCTGTGAATTTCTATCTCAAGTGTTTGCTATACATGTCAGCAAGGAACTGGAACTGGAAAATCAGATCGTGGAGAAGAACATTTTGCGTACACAGACACTATTGTGTGACATGCTGATGCGTGATGCTCCACTCGGTATCGTGTCTCAGAGTCCCAACATAATGGATCTTGTGAAATGTGATGGAGCAGCTCTTCTGTACAAGAACAAGATCTGGAAACTGGGAATAACTCCAACCGACTTCCAGCTGCAAGATATTGCTTCATGGATGTCTGATTACCACAGGGATTCCACGGGTTTGAGCACGGAAAGCTTGTATGATGCTGGCTTTCCGGGGGCTCTGGCTCTCGGAGACTCGGTATGTGGAATGGCAGCAGTGAGGATAACTTCCAAGGACATGGTTTTCTGGTTCCGGTCTCATACTGCTGGAGAAATAAGATGGGGTGGTGCAAAGCATGATCCTGATGAGAAAGATGATTCGAGAAAAATGCATCCTAGGTCATCTTTCAAGGCTTTCCTCGAGGTGGTCAAGACAAGGTGTACACCCTGGAAGGATTATGAAATGGATGCCATTCATTCCTTGCAGCTCATTCTGAGGAATACTTTCAAGGAGACCGATACCATTGATGTGAACACAAATGTGCTCCACTCGAAGTTAAATGATCTAAAACTCGATGGGATTCAAGAACTAGAAGCTGTGACAAGTGAGATGGTTCGCTTGATTGAAACCGCCACTGTTCCGATTTTGGCTGTTGATGCTGATGGATCGATCAATGGTTGGAACACCAAAATTGCTGAGCTAACCGGTCTTCCAGTTGATGAAGCCATCGGAAAGAATTTCCCCACACTTGTTGAAGATTCTTCGGTTGAAAGGGTCAAGAAGATGCTGGAGATGGCATTGGAGGGAACTGAGGAGCAGAACGTTCAATTCGAGATCAAGACACATGGGTCAAGGGTGGATGCGGGGCCAATAAGTTTAGTTGTCAATGCATGTGCAAGTAGAGATCTCCATGAAAATGTGGTTGGAGTGTGTTTCGTTGCTCAAGATCTTACTGCTCAGAAGAATGTGATGGACAAGTTTACCCGGATCGAAGGTGACTACAAGGCCATCATCCAGAACCCGAACCCATTGATCCCTCCCATATTTGGTACGGATGAGTTCGGCTGGTGCACAGAATGGAACCCATCAATGGCAAAGTTAACCGGATGTAAACGTGAGGAAGTGATCGACAAGATGCTGTTGGGAGAGGTCTTTGGGACACAGATGGCGTGCTGCCGTCTTAAGAACCAAGAAGCCTTTGTGAATCTCGGGATTGTGTTGAATAATGCCGTGACCAGTCAAGACTCTGATAAGGTGTCCTTTGCTTTCTTTACGAGGAACGGGAAGTATATAGAGTGTCTTTTGTGTGTGAGCAAGAAACTGGACAGGGAAGGTGTAGTAACCGGTGTCTTCTGTTTCCTGCAACTTGCAAGCCAAGAGCTTCAGCAAGCGCTTCATGTCCAGCGTCTGTCTGAACAAACTGCCTTGAAGAGACTGAAAGCTCTAGCTTACATAAAAAGGCAAATCAGGAATCCTCTGTCGGGGATTATGTTTTCGAGGAAAATGATGGAGAGCACTGAATTAGGACCCGAGCAAAGACAGCTTCTGCACACTAGTGCACAGTGCCAGCGGCAACTCAGCAAGATCCTCGATGATTCAGATCTCGACAGTATCATTGAAGGGTACTTGGATCTGGAAATGACAGAGTTCAGCCTGAATGAGATATTGACTGCTGCCACAAGTCAAGTGATGATGAAGAGCAATGGGAAGAGTGTCCGGATGACGAACGAGACAACAGAAGAAGTGATGAACGATACCTTGTACGGGGACAGCATCAGGCTTCAACAAGTGTTGTCCAATTTCATGCTGATGTCAGTTAGTTTTACGCCGCCTGGAGGGCAGCTTACTCTTATGGCTAGCCTCGGGAAGGATCAACTTGGGCAATCTGTTCATCTTGCCTACCTTGAGATCAGGATAACACATACGGGAGCTGGAATACCGGAATTGTTGCTAAACGAGATGTTTGGAAGTGATGAAGATGTGTCGGAAGAAGGGATGAGTCTTCTGATTAGCCGGAAGCTGGTGAAACTGATGAACGGAGACGTGCATTACTTAAGACAGGCCGGGAAATCTACTTTCATCATTACTGCTGAACTTGCGGCTGCGAACAAATAA
Protein:  
MSASRPARSSDDTRRSRHGARVIAQTTVDAKLHADFEESGSSFDYSSSVRVTGPVVEDQPPRSDKVTTAYLLHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPEMLTMTSHAVPSVGEHPVLGIGTEIRTLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIVDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQTLPSGSMDRLCDTMVQEVFELTGYDRVMAYKFHDDDHGEVISEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMSSIASLVMAVVFNEDEGEGDVPDSAPPHKRKRLWGLVVCHNTTPRFVPFPLRYACEFLSQVFAIHVSKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKNKIWKLGITPTDFQLQDIASWMSDYHRDSTGLSTESLYDAGFPGALALGDSVCGMAAVRITSKDMVFWFRSHTAGEIRWGGAKHDPDEKDDSRKMHPRSSFKAFLEVVKTRCTPWKDYEMDAIHSLQLILRNTFKETDTIDVNTNVLHSKLNDLKLDGIQELEAVTSEMVRLIETATVPILAVDADGSINGWNTKIAELTGLPVDEAIGKNFPTLVEDSSVERVKKMLEMALEGTEEQNVQFEIKTHGSRVDAGPISLVVNACASRDLHENVVGVCFVAQDLTAQKNVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPSMAKLTGCKREEVIDKMLLGEVFGTQMACCRLKNQEAFVNLGIVLNNAVTSQDSDKVSFAFFTRNGKYIECLLCVSKKLDREGVVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYIKRQIRNPLSGIMFSRKMMESTELGPEQRQLLHTSAQCQRQLSKILDDSDLDSIIEGYLDLEMTEFSLNEILTAATSQVMMKSNGKSVRMTNETTEEVMNDTLYGDSIRLQQVLSNFMLMSVSFTPPGGQLTLMASLGKDQLGQSVHLAYLEIRITHTGAGIPELLLNEMFGSDEDVSEEGMSLLISRKLVKLMNGDVHYLRQAGKSTFIITAELAAANK